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Phantom Identity: How the Brain Clings to What No Longer Exists

  • Writer: Dylan Thompson
    Dylan Thompson
  • Apr 21
  • 5 min read
“Phantoms are generated by reorganisations of body image in the sensory cortex.” — V.S. Ramachandran, Phantoms in the Brain

Why Emotional Pain Persists Long After the Cause Is Gone


Can you still feel the pain of a self that no longer exists?


Emotional pain is often misunderstood—not just by society, but by those who experience it. The prevailing narrative suggests that time heals all wounds, that moving on is a matter of choice, and that lingering pain indicates personal failure or emotional weakness. But neuroscience tells a different story—one grounded not in narrative, but in neural architecture.


Pain, whether physical or emotional, is not always an indicator of what’s happening now. It is often a reflection of what the nervous system still expects. The brain is a prediction engine, designed to reduce uncertainty by anticipating the future based on the past. This means that our lived experience is not a direct response to our current environment, but a continuous comparison between what is and what the brain believes should be​​.


When a traumatic or emotionally charged experience becomes deeply encoded, the brain creates an internal model to anticipate future occurrences. This model is retained even when the original context disappears. The pain remains—not because the event is ongoing, but because the system has not yet updated the expectation.


In clinical terms, this is often seen in PTSD, where the nervous system responds to benign stimuli as if the original trauma were recurring. But it also shows up in more subtle, chronic forms of misalignment: the executive who can’t relax even after resigning from the high-pressure role, the adult who still feels unseen in relationships decades after childhood rejection, the high-achiever who overextends because their body still equates stillness with danger.


From a cognitive neuroscience perspective, the amygdala (which processes emotional salience), the hippocampus (which stores contextual memory), and the anterior cingulate cortex (which monitors internal conflict) work in tandem to create a feedback loop of perceived threat, even when no danger exists externally​.


But the deeper issue is not just that the system is reacting—it’s that it believes the reaction is rational. To the nervous system, this pain makes sense based on what it has learned. So you can change your environment, your mindset, your language—but if you don’t address the predictive model driving the reaction, the pain will persist.


This is the hidden architecture behind why so many high performers arrive at Creed Academy with what they describe as “invisible walls.” Externally, they’ve made all the right moves. Internally, they’re still looping through patterns that belong to a version of themselves that no longer exists, but still dominate their system map.


This is not dysfunction. It’s predictive precision gone unchallenged.


So the question is not “Why am I still hurting?”The real question is: What part of me is my nervous system still trying to protect?


That question is the first real step toward updating the internal map, not through force, but through clear, embodied re-perception.


Phantom Limbs and the Mapping of Self in the Brain


In his landmark research, V.S. Ramachandran explored how patients who had lost limbs could still feel them, sometimes with painful intensity. This wasn’t imagined. It was neurological. The sensory cortex retained a mapped image of the limb, and unless that map was updated, the sensation persisted—even in its absence​.


What’s rarely explored is how this applies to the psychological self.


Your brain doesn’t just map your body. It maps your role, identity, relationships, and survival strategies. The version of you who needed to stay small to keep peace, who succeeded in avoiding rejection, who overextended to feel worthy—that version still exists in neural form, even if your conscious mind has moved on.


From a neuroscientific standpoint, the limbic system, insular cortex, and default mode network all play roles in maintaining internal representations of self and others. These systems don’t operate on logic—they operate on felt memory. And unless updated through embodied disruption and integration, they will continue to generate emotional outputs consistent with the past​​.


This is why coaching at Creed Academy isn’t about motivation. It’s about recalibrating perception from the inside out.



Silhouette of a person pressing hands against frosted glass, symbolising emotional entrapment, unresolved trauma, and phantom identity in the nervous system


Identity Loops, Nervous System Memory, and Somatic Interruption


Emotional phantoms are more than memories—they’re predictive loops. They determine how your system filters threats, interprets feedback, engages relationships, and allocates energy. If you’ve ever felt stuck in a behavioural pattern even while consciously wanting to change, this is why.


Your nervous system doesn’t care about your goals. It cares about familiarity.


The hippocampus and amygdala work together to index emotionally charged experiences. When future events resemble those patterns, your brain doesn’t ask if you’ve grown—it assumes the past is repeating. You feel the anxiety, the shutdown, or the self-betrayal not because it’s current, but because your system hasn’t learned to differentiate the new context from the old map​.


At Creed, we use nervous system diagnostics and embodied practices to help clients trace, interrupt, and rewire these loops. The goal isn’t to disown who you were. It’s to update the body’s expectation of who you are now.


You’re Not Broken. You’re Carrying a Version of Yourself That No Longer Fits.


We often mistake internal friction for failure. The anxiety before a conversation, the guilt after resting, the heaviness in joyless success—it all feels like evidence that something inside us is fundamentally wrong. But from the standpoint of neuroscience, this isn't brokenness. It’s an incongruence.


The human brain is built to preserve continuity. It does not simply reflect the present—it preserves what it has already learned to be true, often long after that truth has expired. The version of you that learned to earn love by overachieving, the one that numbed out to survive conflict, the one who wore competence as armour—that version still exists in your system. Not metaphorically, but neurologically.


The default mode network, responsible for self-referential thought, identity, and autobiographical memory, doesn't just store data—it replays it​. And unless it is interrupted through conscious, embodied work, it continues to run those patterns in the background. This is why you can grow, change, even heal—and still find yourself feeling like nothing has shifted.


Because the nervous system doesn’t care about your progress—it cares about predictability. It would rather recreate the pain it knows than risk the freedom it doesn’t.


So no, you're not broken. You are simply outgrowing your neurological template. The emotional pain you're feeling? The friction, the dissonance, the edge? It is not a signal that you're failing. It's a signal that your internal model is being confronted by your external evolution.


At Creed Academy, this is where the real work begins—not with fixing, but with listening, not with positive thinking, but with perceptual clarity. We don't ask who you want to become. We help you see the structure of who you still believe you are—and how your nervous system is organising around that belief.


The work is subtle. It’s diagnostic, not dramatic. But it is transformational.


Because once the system realises that the old role is no longer needed—once it feels the safety of new context—something releases. A phantom dissolves. A loop ends. And what’s left is not a better version of you, but a truer one.

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